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Commit 5fb5805d authored by gotm's avatar gotm
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Initial revision

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BUGS 0 → 100644
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None so far - but missing features.
But if you find any please e-mail to:
karsten@bolding-burchard.com
or
hans@bolding-burchard.com
COPYING 0 → 100644
View file @ 5fb5805d
NOTE! This copyright does *not* cover user programs that use kernel
services by normal system calls - this is merely considered normal use
of the kernel, and does *not* fall under the heading of "derived work".
Also note that the GPL below is copyrighted by the Free Software
Foundation, but the instance of code that it refers to (the Linux
kernel) is copyrighted by me and others who actually wrote it.
Linus Torvalds
----------------------------------------
GNU GENERAL PUBLIC LICENSE
Version 2, June 1991
Copyright (C) 1989, 1991 Free Software Foundation, Inc.
675 Mass Ave, Cambridge, MA 02139, USA
Everyone is permitted to copy and distribute verbatim copies
of this license document, but changing it is not allowed.
Preamble
The licenses for most software are designed to take away your
freedom to share and change it. By contrast, the GNU General Public
License is intended to guarantee your freedom to share and change free
software--to make sure the software is free for all its users. This
General Public License applies to most of the Free Software
Foundation's software and to any other program whose authors commit to
using it. (Some other Free Software Foundation software is covered by
the GNU Library General Public License instead.) You can apply it to
your programs, too.
When we speak of free software, we are referring to freedom, not
price. Our General Public Licenses are designed to make sure that you
have the freedom to distribute copies of free software (and charge for
this service if you wish), that you receive source code or can get it
if you want it, that you can change the software or use pieces of it
in new free programs; and that you know you can do these things.
To protect your rights, we need to make restrictions that forbid
anyone to deny you these rights or to ask you to surrender the rights.
These restrictions translate to certain responsibilities for you if you
distribute copies of the software, or if you modify it.
For example, if you distribute copies of such a program, whether
gratis or for a fee, you must give the recipients all the rights that
you have. You must make sure that they, too, receive or can get the
source code. And you must show them these terms so they know their
rights.
We protect your rights with two steps: (1) copyright the software, and
(2) offer you this license which gives you legal permission to copy,
distribute and/or modify the software.
Also, for each author's protection and ours, we want to make certain
that everyone understands that there is no warranty for this free
software. If the software is modified by someone else and passed on, we
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Finally, any free program is threatened constantly by software
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program proprietary. To prevent this, we have made it clear that any
patent must be licensed for everyone's free use or not licensed at all.
The precise terms and conditions for copying, distribution and
modification follow.
GNU GENERAL PUBLIC LICENSE
TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
0. This License applies to any program or other work which contains
a notice placed by the copyright holder saying it may be distributed
under the terms of this General Public License. The "Program", below,
refers to any such program or work, and a "work based on the Program"
means either the Program or any derivative work under copyright law:
that is to say, a work containing the Program or a portion of it,
either verbatim or with modifications and/or translated into another
language. (Hereinafter, translation is included without limitation in
the term "modification".) Each licensee is addressed as "you".
Activities other than copying, distribution and modification are not
covered by this License; they are outside its scope. The act of
running the Program is not restricted, and the output from the Program
is covered only if its contents constitute a work based on the
Program (independent of having been made by running the Program).
Whether that is true depends on what the Program does.
1. You may copy and distribute verbatim copies of the Program's
source code as you receive it, in any medium, provided that you
conspicuously and appropriately publish on each copy an appropriate
copyright notice and disclaimer of warranty; keep intact all the
notices that refer to this License and to the absence of any warranty;
and give any other recipients of the Program a copy of this License
along with the Program.
You may charge a fee for the physical act of transferring a copy, and
you may at your option offer warranty protection in exchange for a fee.
2. You may modify your copy or copies of the Program or any portion
of it, thus forming a work based on the Program, and copy and
distribute such modifications or work under the terms of Section 1
above, provided that you also meet all of these conditions:
a) You must cause the modified files to carry prominent notices
stating that you changed the files and the date of any change.
b) You must cause any work that you distribute or publish, that in
whole or in part contains or is derived from the Program or any
part thereof, to be licensed as a whole at no charge to all third
parties under the terms of this License.
c) If the modified program normally reads commands interactively
when run, you must cause it, when started running for such
interactive use in the most ordinary way, to print or display an
announcement including an appropriate copyright notice and a
notice that there is no warranty (or else, saying that you provide
a warranty) and that users may redistribute the program under
these conditions, and telling the user how to view a copy of this
License. (Exception: if the Program itself is interactive but
does not normally print such an announcement, your work based on
the Program is not required to print an announcement.)
These requirements apply to the modified work as a whole. If
identifiable sections of that work are not derived from the Program,
and can be reasonably considered independent and separate works in
themselves, then this License, and its terms, do not apply to those
sections when you distribute them as separate works. But when you
distribute the same sections as part of a whole which is a work based
on the Program, the distribution of the whole must be on the terms of
this License, whose permissions for other licensees extend to the
entire whole, and thus to each and every part regardless of who wrote it.
Thus, it is not the intent of this section to claim rights or contest
your rights to work written entirely by you; rather, the intent is to
exercise the right to control the distribution of derivative or
collective works based on the Program.
In addition, mere aggregation of another work not based on the Program
with the Program (or with a work based on the Program) on a volume of
a storage or distribution medium does not bring the other work under
the scope of this License.
3. You may copy and distribute the Program (or a work based on it,
under Section 2) in object code or executable form under the terms of
Sections 1 and 2 above provided that you also do one of the following:
a) Accompany it with the complete corresponding machine-readable
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except as expressly provided under this License. Any attempt
otherwise to copy, modify, sublicense or distribute the Program is
void, and will automatically terminate your rights under this License.
However, parties who have received copies, or rights, from you under
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may not distribute the Program at all. For example, if a patent
license would not permit royalty-free redistribution of the Program by
all those who receive copies directly or indirectly through you, then
the only way you could satisfy both it and this License would be to
refrain entirely from distribution of the Program.
If any portion of this section is held invalid or unenforceable under
any particular circumstance, the balance of the section is intended to
apply and the section as a whole is intended to apply in other
circumstances.
It is not the purpose of this section to induce you to infringe any
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such claims; this section has the sole purpose of protecting the
integrity of the free software distribution system, which is
implemented by public license practices. Many people have made
generous contributions to the wide range of software distributed
through that system in reliance on consistent application of that
system; it is up to the author/donor to decide if he or she is willing
to distribute software through any other system and a licensee cannot
impose that choice.
This section is intended to make thoroughly clear what is believed to
be a consequence of the rest of this License.
8. If the distribution and/or use of the Program is restricted in
certain countries either by patents or by copyrighted interfaces, the
original copyright holder who places the Program under this License
may add an explicit geographical distribution limitation excluding
those countries, so that distribution is permitted only in or among
countries not thus excluded. In such case, this License incorporates
the limitation as if written in the body of this License.
9. The Free Software Foundation may publish revised and/or new versions
of the General Public License from time to time. Such new versions will
be similar in spirit to the present version, but may differ in detail to
address new problems or concerns.
Each version is given a distinguishing version number. If the Program
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either of that version or of any later version published by the Free
Software Foundation. If the Program does not specify a version number of
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Foundation.
10. If you wish to incorporate parts of the Program into other free
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Software Foundation, write to the Free Software Foundation; we sometimes
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NO WARRANTY
11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY
FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN
OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES
PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED
OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE
PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING,
REPAIR OR CORRECTION.
12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR
REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES,
INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING
OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED
TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY
YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER
PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
POSSIBILITY OF SUCH DAMAGES.
END OF TERMS AND CONDITIONS
Appendix: How to Apply These Terms to Your New Programs
If you develop a new program, and you want it to be of the greatest
possible use to the public, the best way to achieve this is to make it
free software which everyone can redistribute and change under these terms.
To do so, attach the following notices to the program. It is safest
to attach them to the start of each source file to most effectively
convey the exclusion of warranty; and each file should have at least
the "copyright" line and a pointer to where the full notice is found.
<one line to give the program's name and a brief idea of what it does.>
Copyright (C) 19yy <name of author>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
Also add information on how to contact you by electronic and paper mail.
If the program is interactive, make it output a short notice like this
when it starts in an interactive mode:
Gnomovision version 69, Copyright (C) 19yy name of author
Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
This is free software, and you are welcome to redistribute it
under certain conditions; type `show c' for details.
The hypothetical commands `show w' and `show c' should show the appropriate
parts of the General Public License. Of course, the commands you use may
be called something other than `show w' and `show c'; they could even be
mouse-clicks or menu items--whatever suits your program.
You should also get your employer (if you work as a programmer) or your
school, if any, to sign a "copyright disclaimer" for the program, if
necessary. Here is a sample; alter the names:
Yoyodyne, Inc., hereby disclaims all copyright interest in the program
`Gnomovision' (which makes passes at compilers) written by James Hacker.
<signature of Ty Coon>, 1 April 1989
Ty Coon, President of Vice
This General Public License does not permit incorporating your program into
proprietary programs. If your program is a subroutine library, you may
consider it more useful to permit linking proprietary applications with the
library. If this is what you want to do, use the GNU Library General
Public License instead of this License.
CodingStyle 0 → 100644
View file @ 5fb5805d
$Id: CodingStyle,v 1.1 2002-05-02 14:00:27 gotm Exp $
In this file a few general rules for coding 'getm' are given.
0: Use of module, subroutine and function templates.
In the template directory example files of modules, subroutines and functions
are available. Please use those if you need to create a new file and please fill
in all relevant information - especially author and description.
1: Indentation
Since Fortran90 allows for free-format we don't have to stick to the column 7
rule. After a bit of testing we have chosen that each new level should be
indented 3 blanks e.g..
subroutine egon
logical is_it_true
integer i,j
kaj = 1
if (is_it_true) then
do i=1,100
j=i
end do
end if
return
end
And please don't put any blanks at the end of lines.
2: Upper and lower case.
We keep everything in lower case.
3: Variable naming conventions.
Highest priority is - readability - therefore we have chosen the C-style
convention - where we use _ instead of mixed upper/lower case variable names.
Variables - especially public variables - should have a meaningful name
like in 'have_boundaries'.
4: Writing diagnostics.
A few pre-processing definitions have been defined in cppdefs.h to ease writing
diagnostics and also to give diagnostics a consistent look. Have a look in
cppdefs.h for the actual definitions. Here is just one example:
Instead of coding:
write(0,*) 'Some diagnostic ouput'
use
STDERR 'Some diagnostic ouput'
This makes it very easy to change the entire diagnostic system in the program
by simply changing the definition of STDERR in cppdefs.h.
To allow for different identations the following set of definitions have been
implemented:
LEVEL0 to LEVEL4 they are to be used as STDERR.
5: Import explicitely variables from modules.
When other modules are used always use the 'ONLY' keyword and do only import
the variables actually needed. This give a much clearerpicture of the data
flow in the programme.
FAQ 0 → 100644
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$Id: FAQ,v 1.1 2002-05-02 14:00:27 gotm Exp $
HISTORY 0 → 100644
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Initial version developed by Hans Burchard in the Matar MAST project.
The original code was not very generel and in order to apply it for
a different area quite a lot should be changed.
Shortly after Karsten Bolding started at JRC we decided to join forces
and turn the original code into a generel purpuse 3D model. The first
step was to remove all non-generel code from the original code. Second
step was to implement generel input-output routines. We decided to use
NETCDF as file format. Third step was to implement baroclinic effects.
In late July 1998 the first beta was ready - still with some missing
features - and was run for different simple test cases.
980724:
INSTALL 0 → 100644
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$Id: INSTALL,v 1.1 2002-05-02 14:00:28 gotm Exp $
Makefile 0 → 100644
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#
# Master Makefile for the getm project.
#
VERSION = 1
PATCHLEVEL = 1
SUBLEVEL = 0
VER = $(VERSION).$(PATCHLEVEL).$(SUBLEVEL)
EXEC = model$(libtype)
base = BUGS INSTALL README TODO HISTORY
all: VERSION $(EXEC) doc
$(EXEC): include/version.h
$(MAKE) -C src $(EXEC) install
include/version.h: ./Makefile
@echo \#define RELEASE \"$(VERSION).$(PATCHLEVEL).$(SUBLEVEL)\" > .ver
@mv -f .ver $@
VERSION: ./Makefile
@echo $(VERSION).$(PATCHLEVEL).$(SUBLEVEL) > $@
doc:
$(MAKE) -C src/ doc
set -e; for i in $(SUBDIRS); do $(MAKE) -C $$i doc; done
clean:
rm -f VERSION
distclean:
$(MAKE) -C src distclean
$(MAKE) -C utils distclean
dist: distclean
(cd ../ ; tar cf - v$(VER)/ | gzip -9 > v$(VER).tar.gz)
sync
diff:
cvs diff > cvs.diff
vi cvs.diff
$(RM) cvs.diff
update:
cvs update > cvs.update
vi cvs.update
$(RM) cvs.update
cvs2cl
vi ChangeLog
commit:
cvs commit > cvs.commit
vi cvs.commit
dummy:
README 0 → 100644
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$Id: README,v 1.1 2002-05-02 14:00:28 gotm Exp $
README.compile 0 → 100644
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$Id: README.compile,v 1.1 2002-05-02 14:00:29 gotm Exp $
To be written
TODO 0 → 100644
View file @ 5fb5805d
$Id: TODO,v 1.1 2002-05-02 14:00:29 gotm Exp $
doc/.log 0 → 100644
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This is TeX, Version 3.14159 (Web2C 7.3.7) (format=latex 2001.12.11) 5 JAN 2002 18:08
**code_letter
(/usr/share/texmf/tex/latex/tools/.tex
! Interruption.
<to be read again>
\begingroup
l.1
%%
? X
Here is how much of TeX's memory you used:
5 strings out of 10847
122 string characters out of 70945
44507 words of memory out of 263001
3034 multiletter control sequences out of 10000+0
3640 words of font info for 14 fonts, out of 400000 for 1000
14 hyphenation exceptions out of 1000
3i,0n,1p,18b,6s stack positions out of 300i,100n,500p,50000b,4000s
No pages of output.
include/cppdefs.h 0 → 100644
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! This file is include in all .F90 files and contains very important
! difinitions. Infact the model will not compile when this file is not
! in a correct format.
! KBK 990615
#include "version.h"
#if defined(SPHERICAL) || defined(CURVILINEAR)
#define DXC dxc(i,j)
#define DXCJP1 dxc(i,j+1)
#define DXU dxu(i,j)
#define DXV dxv(i,j)
#define DXVJM1 dxv(i,j-1)
#define DXX dxx(i,j)
#define DXXJM1 dxx(i,j-1)
#define DYC dyc(i,j)
#define DYCIP1 dyc(i+1,j)
#define DYU dyu(i,j)
#define DYUIM1 dyu(i-1,j)
#define DYV dyv(i,j)
#define DYX dyx(i,j)
#define DYXIM1 dyx(i-1,j)
#define ARCD1 arcd1(i,j)
#define ARUD1 arud1(i,j)
#define ARVD1 arvd1(i,j)
#else
#define DXC dx
#define DXCJP1 dx
#define DXU dx
#define DXV dx
#define DXVJM1 dx
#define DXX dx
#define DXXJM1 dx
#define DYC dy
#define DYCIP1 dy
#define DYU dy
#define DYUIM1 dy
#define DYV dy
#define DYX dy
#define DYXIM1 dy
#define ARCD1 ard1
#define ARUD1 ard1
#define ARVD1 ard1
#endif
! Reserved Fortran units
#define stdin 5
#define stdout 6
#define stderr 0
#define debug 0
#define NAMLST 10
#define RESTART 15
#define PARSETUP 20
#define BDYINFO 21
#define BDYDATA 22
! Data/file formats
#define ANALYTICAL 0
#define ASCII 1
#define NETCDF 2
#define RAWBINARY 3
#define OPENDX 4
#define GRADS 5
#define PATH_MAX 255
! Handy for writing
#define STDOUT write(stdout,*)
#define STDERR write(stderr,*)
#define LEVEL0 STDERR
#define LEVEL1 STDERR ' ',
#define LEVEL2 STDERR ' ',
#define LEVEL3 STDERR ' ',
#define LEVEL4 STDERR ' ',
#define FATAL STDERR 'FATAL ERROR: ',
!KBK#define STDERR IF(myid.le.0) write(stderr,*)
#define LINE "------------------------------------------------------------------------"
! For easier reading
#define READING 0
#define WRITING 1
! To avoid dividing by zero
#define SMALL 1e-8
! What precision will we use in this compilation
#define SINGLE
#undef SINGLE
#ifdef SINGLE
#define REALTYPE REAL
#define REAL_SIZE 4
#define _ZERO_ 0.0
#define _ONE_ 1.0
#else
#define REALTYPE DOUBLE PRECISION
#define MPI_REALTYPE MPI_DOUBLE_PRECISION
#define REAL_SIZE 8
#define _ZERO_ 0.0d0
#define _ONE_ 1.0d0
#endif
! The width of the HALO zones
#define HALO 1
! Here the memory-allocation is defined
#define E2DFIELD imin-HALO:imax+HALO,jmin-HALO:jmax+HALO
#define I2DFIELD iimin-HALO:iimax+HALO,jjmin-HALO:jjmax+HALO
#define I3DFIELD iimin-HALO:iimax+HALO,jjmin-HALO:jjmax+HALO,0:kmax
! These defines the do loops for the real inner points..
! that is the points that are independent of neighbours.